Accession
MI0020257
Description
Solanum lycopersicum
sly-MIR6026 precursor miRNA
Literature search
6 open access papers mention sly-MIR6026
(19 sentences)
(19 sentences)
Sequence
77621
reads,
2155.0
reads per million, 76 experiments
cacuuugauuugguAAUACAACUAUAGCCAAGACAAugcuucauuauaagugcauaacuuuucacuuuauuguuugagcauuguguugauuucucuaaacuuguuuuucguugaacaagauuguuuuuucauauacucauggaaagcaacaccgugcucagaaguuagagugaaauguuaugcauuugugauuauauauuUUCUUGGCUAGAGUUGUAUUGCcaagugaaguguuuuaauug
((((((.((((((((((((((((.(((((((((.((((....((((((((((((((((.((((((((((...(((((((((.((((((...........(((((((......))))))).....((((((((......)))))))))))))).)))))))))...)))))))))).))))))))))))))))....)))).))))))))).)))))))))))))))))))))).........
((((((.((((((((((((((((.(((((((((.((((....((((((((((((((((.((((((((((...(((((((((.((((((...........(((((((......))))))).....((((((((......)))))))))))))).)))))))))...)))))))))).))))))))))))))))....)))).))))))))).)))))))))))))))))))))).........
Structure
--------- g A C cuuc u uug u auuucucuaaacuuguuuuucguugaacaagauugu au
cacuuu auuugguAAUACAACU UAGCCAAGA AAug auuauaagugcauaac uuucacuuua uuugagcau guguug uuuuucau a
|||||| |||||||||||||||| ||||||||| |||| |||||||||||||||| |||||||||| ||||||||| |||||| ||||||||
gugaag ugaacCGUUAUGUUGA AUCGGUUCU uuau uaguguuuacguauug aaagugagau agacucgug cacaac gaaaggua c
guuaauuuu - G U auau u uga c ------------------------------------ cu
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr1: 832340-832581 [+]
Database links
Mature sly-miR6026-5p
| Accession | MIMAT0055738 |
| Description | Solanum lycopersicum sly-miR6026-5p mature miRNA |
| Sequence | 15 - AAUACAACUAUAGCCAAGACAA - 36 |
| Evidence |
experimental
unknown |
Mature sly-miR6026-3p
| Accession | MIMAT0023610 |
| Description | Solanum lycopersicum sly-miR6026-3p mature miRNA |
| Sequence | 201 - UUCUUGGCUAGAGUUGUAUUGC - 222 |
| Evidence | not_experimental |
References
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