Stem-loop ame-mir-6039

Accession

MI0020306

Description

Apis mellifera ame-mir-6039 precursor miRNA

Sequence

1014 reads, 16.0 reads per million, 24 experiments

uucuacuuuaAAUCGAACGCGUGAGUUUACGUguagcauugagcauuuaagcgacGUAGACACACGUGUUGGACCUUagaguagaauu
(((((((((((.((.((((((((.((((((((...((.((((....)))))).)))))))).)))))))).))..)))))))))))..

Structure

--           -A  G        A        gua  a    g 
  uucuacuuuaA  UC AACGCGUG GUUUACGU   gc uuga c
  |||||||||||  || |||||||| ||||||||   || ||||  
  aagaugagaUU  AG UUGUGCAC CAGAUGca   cg aauu a
uu           CC  G        A        --g  -    u 

Annotation confidence High

Genome context

GL630519.1: 17765-17852 [+]

Mature ame-miR-6039-5p

• Accession: MIMAT0023659
• Description: Apis mellifera ame-miR-6039-5p mature miRNA
• Sequence: 11 - AAUCGAACGCGUGAGUUUACGU - 32
• Evidence: experimental ; Illumina [1-3]

Mature ame-miR-6039-3p

• Accession: MIMAT0053111
• Description: Apis mellifera ame-miR-6039-3p mature miRNA
• Sequence: 56 - GUAGACACACGUGUUGGACCUU - 77
• Evidence: experimental ; Illumina [1-3]

References

1. PubMed ID: 22458842
   Next-generation small RNA sequencing for microRNAs profiling in Apis mellifera: comparison between nurses and foragers
   "Liu F, Peng W, Li Z, Li W, Li L, Pan J, Zhang S, Miao Y, Chen S, Su S"
   "Insect Mol Biol (2012) 21:297-303


2. PubMed ID: 22409512
   Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
   "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
   "Genes Brain Behav (2012) 11:660-670


3. PubMed ID: 26853694
   MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
   "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
   "Insect Mol Biol (2016) 25:216-226