Stem-loop ame-mir-252b

Accession

MI0020309

Description

Apis mellifera ame-mir-252b precursor miRNA

Literature search

3 open access papers mention ame-mir-252b
(3 sentences)

Sequence

11886 reads, 177.0 reads per million, 24 experiments

aaucugucugUUAAGUAGUAGUGUCGUAGAUGAugauuuagaaauucAUCUUGGCACGAUUACUUUUCAuauagaaaua
..(((((.((..(((((((.((((((.((((((............)))))))))))).)))))))..)).)))))....

Structure

--aa     c  UU       A      U      ugauu 
    ucugu ug  AAGUAGU GUGUCG AGAUGA     u
    ||||| ||  ||||||| |||||| ||||||      
    agaua AC  UUCAUUA CACGGU UCUAcu     a
auaa     u  UU       G      -      uaaag 

Annotation confidence High

Genome context

CM000066.5: 7011507-7011585 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from ame-mir-252b

Mature ame-miR-252b-5p

• Accession: MIMAT0023662
• Description: Apis mellifera ame-miR-252b-5p mature miRNA
• Sequence: 11 - UUAAGUAGUAGUGUCGUAGAUGA - 33
• Evidence: experimental ; Illumina [1-3]

Mature ame-miR-252b-3p

• Accession: MIMAT0053113
• Description: Apis mellifera ame-miR-252b-3p mature miRNA
• Sequence: 48 - AUCUUGGCACGAUUACUUUUCA - 69
• Evidence: experimental ; Illumina [1-3]

References

1. PubMed ID: 22458842
   Next-generation small RNA sequencing for microRNAs profiling in Apis mellifera: comparison between nurses and foragers
   "Liu F, Peng W, Li Z, Li W, Li L, Pan J, Zhang S, Miao Y, Chen S, Su S"
   "Insect Mol Biol (2012) 21:297-303


2. PubMed ID: 22409512
   Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
   "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
   "Genes Brain Behav (2012) 11:660-670


3. PubMed ID: 26853694
   MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
   "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
   "Insect Mol Biol (2016) 25:216-226