Stem-loop ame-mir-6042

Accession

MI0020311

Description

Apis mellifera ame-mir-6042 precursor miRNA

Sequence

uccuucgacgauaccuaccacuguacuaucgucgccugcuugcaacggUAGGAACGGUAGUAGUGGAGAauugcugugg
.((..((.((((..((.(((((..((((((((..((((((......)))))).))))))))))))))).)))).)).))

Structure

u  uu  a    ac  a     gu        cg      ug 
 cc  cg cgau  cu ccacu  acuaucgu  ccugcu  c
 ||  || ||||  || |||||  ||||||||  ||||||   
 gg  gu guua  GA GGUGA  UGAUGGCA  GGAUgg  a
-  -u  c    -A  -     --        -A      ca 

Annotation confidence Low

Genome context

CM000059.5: 11037290-11037368 [-]

Mature ame-miR-6042-3p

• Accession: MIMAT0023664
• Description: Apis mellifera ame-miR-6042-3p mature miRNA
• Sequence: 49 - UAGGAACGGUAGUAGUGGAGA - 69
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 22458842
   Next-generation small RNA sequencing for microRNAs profiling in Apis mellifera: comparison between nurses and foragers
   "Liu F, Peng W, Li Z, Li W, Li L, Pan J, Zhang S, Miao Y, Chen S, Su S"
   "Insect Mol Biol (2012) 21:297-303


2. PubMed ID: 26853694
   MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
   "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
   "Insect Mol Biol (2016) 25:216-226