Stem-loop ame-mir-6053

Accession

MI0020324

Description

Apis mellifera ame-mir-6053 precursor miRNA

Sequence

aaucgucucaAUACGAAAGACCGCGCGGAUGUgucguuagugugcacguguucuuuacgcucgcgcaguguuucguaaagagaagagg
..((.((((..(((((((.((.((((((..(((((......).))))((((.....)))))))))).)).)))))))..)))).))..

Structure

aa  g    aA       G  C      -----------AU    - gu 
  uc ucuc  UACGAAA AC GCGCGG             GUgu c  u
  || ||||  ||||||| || ||||||             |||| |   
  ag agag  augcuuu ug cgcgcu             cacg g  a
gg  a    aa       g  a      cgcauuucuugug    u ug 

Annotation confidence Low

Genome context

CM000054.5: 26573156-26573243 [+]

Mature ame-miR-6053-5p

• Accession: MIMAT0023677
• Description: Apis mellifera ame-miR-6053-5p mature miRNA
• Sequence: 11 - AUACGAAAGACCGCGCGGAUGU - 32
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 22458842
   Next-generation small RNA sequencing for microRNAs profiling in Apis mellifera: comparison between nurses and foragers
   "Liu F, Peng W, Li Z, Li W, Li L, Pan J, Zhang S, Miao Y, Chen S, Su S"
   "Insect Mol Biol (2012) 21:297-303


2. PubMed ID: 26853694
   MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
   "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
   "Insect Mol Biol (2016) 25:216-226