miRBase entry: ame-mir-6057

Stem-loop ame-mir-6057

Accession

MI0020328

Description

Apis mellifera ame-mir-6057 precursor miRNA

Sequence

gauauuucgaUUUGUGACUGUAACAACAAAUGgaaaaaagacauauuuguuguuauguuugcaaauuaagcuauc
((((.((.(((((((((.((((((((((((((...........)))))))))))))).))))))))).)).))))

Structure

    u  c         C              gaaa 
gaua uu gaUUUGUGA UGUAACAACAAAUG    a
|||| || ||||||||| ||||||||||||||    a
cuau ga uuaaacguu guauuguuguuuau    a
    c  a         u              acag

Annotation confidence Not enough data

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Genome context

CM000066.5: 7011877-7011951 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from ame-mir-6057

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ame-miR-6057-5p

Accession	MIMAT0023681
Description	Apis mellifera ame-miR-6057-5p mature miRNA
Sequence	11 - UUUGUGACUGUAACAACAAAUG - 32
Evidence	experimental Illumina [1-2]

References

PubMed ID: 22458842
Next-generation small RNA sequencing for microRNAs profiling in Apis mellifera: comparison between nurses and foragers
"Liu F, Peng W, Li Z, Li W, Li L, Pan J, Zhang S, Miao Y, Chen S, Su S"
"Insect Mol Biol (2012) 21:297-303

PubMed ID: 22409512
Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
"Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
"Genes Brain Behav (2012) 11:660-670