Stem-loop ame-mir-6060

Accession

MI0020331

Description

Apis mellifera ame-mir-6060 precursor miRNA

Sequence

343 reads, 4.0 reads per million, 22 experiments

aguaaggagcACGGGUACGACGUUGGCAACGUgaacaaccgcgUUGCCCCCUUGUCCCCGAGAUccaaacc
.....(((...((((.((((.(..(((((((((......)))))))))..))))).))))...))).....

Structure

aguaa   gcA    U    C UU         aa 
     gga   CGGG ACGA G  GGCAACGUg  c
     |||   |||| |||| |  |||||||||   
     ccU   GCCC UGUU C  CCGUUgcgc  a
ccaaa   AGA    C    - CC         ca 

Annotation confidence High

Genome context

CM000055.5: 13479079-13479149 [+]

Mature ame-miR-6060-5p

• Accession: MIMAT0023684
• Description: Apis mellifera ame-miR-6060-5p mature miRNA
• Sequence: 11 - ACGGGUACGACGUUGGCAACGU - 32
• Evidence: experimental ; Illumina [1]

Mature ame-miR-6060-3p

• Accession: MIMAT0053117
• Description: Apis mellifera ame-miR-6060-3p mature miRNA
• Sequence: 44 - UUGCCCCCUUGUCCCCGAGAU - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22458842
   Next-generation small RNA sequencing for microRNAs profiling in Apis mellifera: comparison between nurses and foragers
   "Liu F, Peng W, Li Z, Li W, Li L, Pan J, Zhang S, Miao Y, Chen S, Su S"
   "Insect Mol Biol (2012) 21:297-303