Stem-loop ame-mir-6061

Accession

MI0020332

Description

Apis mellifera ame-mir-6061 precursor miRNA

Sequence

265 reads, 3.0 reads per million, 24 experiments

uugucaucggACGUGGUACAUGCCGAACGUUCGUucucguaauaaauGACGUUGCACGUUACCACGCCGgaugucacuc
.((.((((((.((((((((.(((..(((((.((((.........)))))))))))).).))))))))).)))).))...

Structure

--u  u    -  A       - A   CG     U    cuc 
   ug cauc gg CGUGGUA C UGC  AACGU CGUu   g
   || |||| || ||||||| | |||  ||||| ||||   u
   ac guag CC GCACCAU G ACG  UUGCA Guaa   a
cuc  u    G  -       U C   --     -    aua 

Annotation confidence Medium

Genome context

CM000063.5: 6629421-6629499 [+]

Mature ame-miR-6061-5p

• Accession: MIMAT0053118
• Description: Apis mellifera ame-miR-6061-5p mature miRNA
• Sequence: 11 - ACGUGGUACAUGCCGAACGUUCGU - 34
• Evidence: experimental ; Illumina [1]

Mature ame-miR-6061-3p

• Accession: MIMAT0023685
• Description: Apis mellifera ame-miR-6061-3p mature miRNA
• Sequence: 48 - GACGUUGCACGUUACCACGCCG - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22458842
   Next-generation small RNA sequencing for microRNAs profiling in Apis mellifera: comparison between nurses and foragers
   "Liu F, Peng W, Li Z, Li W, Li L, Pan J, Zhang S, Miao Y, Chen S, Su S"
   "Insect Mol Biol (2012) 21:297-303