Stem-loop ame-mir-6047b

Accession

MI0020335

Description

Apis mellifera ame-mir-6047b precursor miRNA

Sequence

309 reads, 5.0 reads per million, 24 experiments

aucaggaaauuGUGGACUGUAGGCUGUGGACUgcgggaagcagCACAGGCCAGUCAGUCCACUAaacaaaaca
...........((((((((..(((((((..((((.....)))))))).)))...))))))))...........

Structure

aucaggaaauu        -UA   -    GA    g 
           GUGGACUG   GGC UGUG  CUgc g
           ||||||||   ||| ||||  |||| g
           CACCUGAC   CCG ACAC  gacg a
acaaaacaaAU        UGA   G    --    a 

Annotation confidence Medium

Genome context

GL630354.1: 170663-170735 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ame-mir-6047b

Mature ame-miR-6047b-5p

• Accession: MIMAT0053119
• Description: Apis mellifera ame-miR-6047b-5p mature miRNA
• Sequence: 12 - GUGGACUGUAGGCUGUGGACU - 32
• Evidence: experimental ; Illumina [1]

Mature ame-miR-6047b-3p

• Accession: MIMAT0023688
• Description: Apis mellifera ame-miR-6047b-3p mature miRNA
• Sequence: 44 - CACAGGCCAGUCAGUCCACUA - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22458842
   Next-generation small RNA sequencing for microRNAs profiling in Apis mellifera: comparison between nurses and foragers
   "Liu F, Peng W, Li Z, Li W, Li L, Pan J, Zhang S, Miao Y, Chen S, Su S"
   "Insect Mol Biol (2012) 21:297-303