miRBase entry: ame-mir-6047b

Stem-loop ame-mir-6047b

Accession

MI0020335

Description

Apis mellifera ame-mir-6047b precursor miRNA

Sequence

aucaggaaauuguggacuguaggcuguggacugcgggaagcAGCACAGGCCAGUCAGUCCACUaaacaaaaca
...........((((((((..(((((((..((((.....)))))))).)))...))))))))...........

Structure

aucaggaaauu        -ua   -    ga    g 
           guggacug   ggc ugug  cugc g
           ||||||||   ||| ||||  |||| g
           CACCUGAC   CCG ACAC  GAcg a
acaaaacaaaU        UGA   G    --    a

Annotation confidence Not enough data

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Genome context

GL630354.1: 170663-170735 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ame-mir-6047b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ame-miR-6047b-3p

Accession	MIMAT0023688
Description	Apis mellifera ame-miR-6047b-3p mature miRNA
Sequence	42 - AGCACAGGCCAGUCAGUCCACU - 63
Evidence	experimental Illumina [1]

References

PubMed ID: 22458842
Next-generation small RNA sequencing for microRNAs profiling in Apis mellifera: comparison between nurses and foragers
"Liu F, Peng W, Li Z, Li W, Li L, Pan J, Zhang S, Miao Y, Chen S, Su S"
"Insect Mol Biol (2012) 21:297-303