Stem-loop cgr-let-7g

Accession

MI0020373

Description

Cricetulus griseus cgr-let-7g precursor miRNA

Sequence

347858 reads, 4819 reads per million, 6 experiments

auuccaggcUGAGGUAGUAGUUUGUACAGUUugagggucuaugauaccacccgguacaggagauaaCUGUACAGGCCACUGCCUUGCcaggaacagc
.((((.(((.((((((((.((((((((((((.....((((.((.((((....))))))..)))))))))))))))).))))))))))).))))....

Structure

---a    a   U        A            ugagg    -a  a    a 
    uucc ggc GAGGUAGU GUUUGUACAGUU     gucu  ug uacc c
    |||| ||| |||||||| ||||||||||||     ||||  || ||||  
    aagg cCG UUCCGUCA CGGACAUGUCaa     uaga  ac augg c
cgac    a   -        C            -----    gg  -    c 

Annotation confidence Low

Genome context

JH000078.1: 2992041-2992137 [+]

Mature cgr-let-7g-5p

• Accession: MIMAT0023722
• Description: Cricetulus griseus cgr-let-7g-5p mature miRNA
• Sequence: 10 - UGAGGUAGUAGUUUGUACAGUU - 31
• Evidence: experimental ; Illumina [1]

Mature cgr-let-7g-3p

• Accession: MIMAT0023723
• Description: Cricetulus griseus cgr-let-7g-3p mature miRNA
• Sequence: 67 - CUGUACAGGCCACUGCCUUGC - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75