Stem-loop cgr-mir-1903

Accession

MI0020435

Description

Cricetulus griseus cgr-mir-1903 precursor miRNA

Sequence

5642 reads, 52 reads per million, 6 experiments

ugugagccacuauguuggugcuaggaauugaacucagguccuCUGGAAGAGGAACAAGUGcucucaccug
.(((((.((((.((((..(.(.((((.(((....))).))))..).).....))))))))..)))))...

Structure

--u     -c    a    ---gg g -u    a   a 
   gugag  cacu uguu     u c  agga uug a
   |||||  |||| ||||     | |  |||| |||  
   cacuc  GUGA ACAA     A G  uccu gac c
guc     uc    -    GGAGA G UC    g   u 

Annotation confidence Low

Genome context

JH000062.1: 1861154-1861223 [+]

Mature cgr-miR-1903

• Accession: MIMAT0023820
• Description: Cricetulus griseus cgr-miR-1903 mature miRNA
• Sequence: 43 - CUGGAAGAGGAACAAGUG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75