Stem-loop cgr-mir-191

Accession

MI0020437

Description

Cricetulus griseus cgr-mir-191 precursor miRNA

Literature search

2 open access papers mention cgr-mir-191
(3 sentences)

Sequence

3325929 reads, 18909.0 reads per million, 55 experiments

gacagcgggCAACGGAAUCCCAAAAGCAGCUGUugucucgagagcauuccaGCUGCGCUUGGAUUUCGUUCCCUGcucuccug
((.((((((.((((((((((.((..(((((((.(((.......)))...)))))))..)))))))))))).)))))).))...

Structure

---  c      C          C  AA       --U   cu 
   ga agcggg AACGGAAUCC AA  GCAGCUG   ugu  c
   || |||||| |||||||||| ||  |||||||   |||  g
   cu ucGUCC UUGCUUUAGG UU  CGUCGac   acg  a
guc  c      C          -  CG       cuu   ag 

Annotation confidence High

Genome context

JH001800.1: 109036-109118 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cgr-mir-191

Mature cgr-miR-191-5p

• Accession: MIMAT0023822
• Description: Cricetulus griseus cgr-miR-191-5p mature miRNA
• Sequence: 10 - CAACGGAAUCCCAAAAGCAGCUGU - 33
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-191-3p

• Accession: MIMAT0023823
• Description: Cricetulus griseus cgr-miR-191-3p mature miRNA
• Sequence: 52 - GCUGCGCUUGGAUUUCGUUCCCUG - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75