Stem-loop cgr-mir-2424

Accession

MI0020469

Description

Cricetulus griseus cgr-mir-2424 precursor miRNA

Sequence

3109 reads, 43 reads per million, 6 experiments

caaaggacuuagcuauaucauggccacugagagaugacacACAGAUCUUUGGUAAUCUGAUGGCUacaagugcua
...((.((((((((((......((((..((((..((.....))..))))))))......)))))))..))).)).

Structure

caa  g   --       aucaug    cu    ga  a 
   ag acu  uagcuau      gcca  gaga  ug c
   || |||  |||||||      ||||  ||||  || a
   uc uga  aUCGGUA      UGGU  UUCU  AC c
--a  g   ac       GUCUAA    --    AG  A 

Annotation confidence Low

Genome context

JH000031.1: 3549956-3550030 [+]

Mature cgr-miR-2424

• Accession: MIMAT0023868
• Description: Cricetulus griseus cgr-miR-2424 mature miRNA
• Sequence: 41 - ACAGAUCUUUGGUAAUCUGAUGGCU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75