Stem-loop cgr-mir-322

Accession

MI0020492

Description

Cricetulus griseus cgr-mir-322 precursor miRNA

Sequence

116332 reads, 1614 reads per million, 6 experiments

cgaagggaugCAGCAGCAAUUCAUGUUUUGGaguauuguaaagguucaAAACAUGAAGCGCUGCAACACcccuucgcg
(((((((.((..(((((..(((((((((((((.(........).)))))))))))))..)))))..)).)))))))..

Structure

--       a  CA     AA             g auu 
  cgaaggg ug  GCAGC  UUCAUGUUUUGGa u   g
  ||||||| ||  |||||  ||||||||||||| |    
  gcuuccc AC  CGUCG  AAGUACAAAacuu g   u
gc       C  AA     CG             g aaa 

Annotation confidence Not enough data

Genome context

JH000353.1: 1175630-1175707 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from cgr-mir-322

Mature cgr-miR-322-5p

• Accession: MIMAT0023907
• Description: Cricetulus griseus cgr-miR-322-5p mature miRNA
• Sequence: 11 - CAGCAGCAAUUCAUGUUUUGG - 31
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-322-3p

• Accession: MIMAT0023908
• Description: Cricetulus griseus cgr-miR-322-3p mature miRNA
• Sequence: 49 - AAACAUGAAGCGCUGCAACAC - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75