Stem-loop cgr-mir-744

Accession

MI0020555

Description

Cricetulus griseus cgr-mir-744 precursor miRNA

Sequence

50996 reads, 684 reads per million, 6 experiments

ugggcaaggUGCGGGGCUAGGGCUAACAGCagucuuacugaagguuuccuggaaaccacacacaugCUGUUGCCACUAACCUCAACCuuacucgguc
((((.(((((..((((.((((((.(((((((.......((..((((((...)))))).))....)))))))))).))).)))).))))).))))...

Structure

---    c     GC    C   -   U       gucuuac  aa      c 
   uggg aaggU  GGGG UAG GGC AACAGCa       ug  gguuuc  
   |||| |||||  |||| ||| ||| |||||||       ||  |||||| u
   gcuc uuCCA  CUCC AUC CCG UUGUCgu       ac  ccaaag  
cug    a     -A    A   A   -       ---acac  -a      g 

Annotation confidence High

Genome context

JH000072.1: 2126137-2126233 [+]

Mature cgr-miR-744-5p

• Accession: MIMAT0024002
• Description: Cricetulus griseus cgr-miR-744-5p mature miRNA
• Sequence: 10 - UGCGGGGCUAGGGCUAACAGC - 30
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-744-3p

• Accession: MIMAT0024003
• Description: Cricetulus griseus cgr-miR-744-3p mature miRNA
• Sequence: 67 - CUGUUGCCACUAACCUCAACC - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75