Stem-loop ptr-mir-3151

Accession

MI0020578

Description

Pan troglodytes ptr-mir-3151 precursor miRNA

Sequence

1041 reads, 8.0 reads per million, 21 experiments

auacaaccuuuggggugaugGGUGGGGCAAUGGGAUCAGGUGccucaaagggcaucccaCCUGAUCCCACAGCCCCACCUGUCaccccaaaagccugcugcuccugcccu
........((((((((((((((((((((..(((((((((((((((....)))).....)))))))))))..))))))))))))))))))))(((.....)))........

Structure

-----------auacaacc                    AA           -----    c 
                   uuuggggugaugGGUGGGGC  UGGGAUCAGGU     Gccu a
                   ||||||||||||||||||||  |||||||||||     ||||  
                   aaaccccaCUGUCCACCCCG  ACCCUAGUCCa     cggg a
ucccguccucgucguccga                    AC           cccua    a 

Annotation confidence High

Genome context

chr8: 105098667-105098776 [+]

Mature ptr-miR-3151-5p

• Accession: MIMAT0024031
• Description: Pan troglodytes ptr-miR-3151-5p mature miRNA
• Sequence: 21 - GGUGGGGCAAUGGGAUCAGGUG - 42
• Evidence: experimental ; Illumina [1]

Mature ptr-miR-3151-3p

• Accession: MIMAT0061153
• Description: Pan troglodytes ptr-miR-3151-3p mature miRNA
• Sequence: 60 - CCUGAUCCCACAGCCCCACCUGUC - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116