Stem-loop ptr-mir-3127

Accession

MI0020585

Description

Pan troglodytes ptr-mir-3127 precursor miRNA

Sequence

ccccuaggcuggccaggcccAUCAGGGCUUGUGGAAUGGGAAGgagaagggacgcuuccccuucugcaggccugcuggguguggcuggaccccucgugugcucacccacuc
......(((((((((.(((((.((((.(((((((((.((((((...........)))))).))))))))))))).))))).))))))).))....(((....)))......

Structure

--------------ccccua  -       g     U    G         U      gaga 
                    gg cuggcca gcccA CAGG CUUGUGGAA GGGAAG    a
                    || ||||||| ||||| |||| ||||||||| ||||||    g
                    cc ggucggu ugggu gucc ggacgucuu cccuuc    g
cucacccacucgugugcucc  a       g     c    -         c      gcag 

Annotation confidence Not enough data

Genome context

chr2A: 95927158-95927268 [+]

Mature ptr-miR-3127

• Accession: MIMAT0024038
• Description: Pan troglodytes ptr-miR-3127 mature miRNA
• Sequence: 21 - AUCAGGGCUUGUGGAAUGGGAAG - 43
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116