Stem-loop ptr-mir-3660

Accession

MI0020587

Description

Pan troglodytes ptr-mir-3660 precursor miRNA

Sequence

agugaaaaggagaaagaagaacuggacaaaauuaaaaugcucuucugucaguguaauaguucauaugggcACUGACAGGAGAGCGUUUUGAcuuugucaagugugucugc
..............(((...(((.((((((.(((((((((((((((((((((((.(((.....)))..))))))))))))))))))))))).)))))).)))...)))..

Structure

agugaaaaggagaa   aga   g      a                       -a   g 
              aga   acu gacaaa uuaaaaugcucuucugucagugu  aua u
              |||   ||| |||||| |||||||||||||||||||||||  ||| u
              ucu   uga cuguuu AGUUUUGCGAGAGGACAGUCAcg  uau c
------------cg   gug   a      c                       gg   a 

Annotation confidence Not enough data

Genome context

chr5: 25598617-25598726 [+]

Mature ptr-miR-3660

• Accession: MIMAT0024040
• Description: Pan troglodytes ptr-miR-3660 mature miRNA
• Sequence: 71 - ACUGACAGGAGAGCGUUUUGA - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116