Stem-loop ptr-mir-3192

Accession

MI0020589

Description

Pan troglodytes ptr-mir-3192 precursor miRNA

Sequence

ggaaagacagaggaagggauUCUGGGAGGUUGUAGCAGUGGAaaaaguucuuuucuuccucugaucgcccucucagcucuuuccuucugacugaaaaucaucuucagcaccu
.......(((((((((((...((((((((.((...(((.((((.(((....))).)))).)))..)).)))))))).))))))).)))).(((((.......))))).....

Structure

----------------ggaaaga    -       auU        U  UAG   U    a   u 
                       caga ggaaggg   CUGGGAGG UG   CAG GGAa aag u
                       |||| |||||||   |||||||| ||   ||| |||| |||  
                       gucu ccuuucu   gacucucc gc   guc ccuu uuu c
uccacgacuucuacuaaaaguca    u       --c        c  -ua   u    c   u 

Annotation confidence Not enough data

Genome context

chr20: 18446570-18446681 [+]

Mature ptr-miR-3192

• Accession: MIMAT0024042
• Description: Pan troglodytes ptr-miR-3192 mature miRNA
• Sequence: 21 - UCUGGGAGGUUGUAGCAGUGGA - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116