Stem-loop ptr-mir-378b

Accession

MI0020591

Description

Pan troglodytes ptr-mir-378b precursor miRNA

Sequence

ggccucaguuuccuccacugaagaaugggaggaggcuggucauugagucuucaaggcuaguggaaagagcACUGGACUUGGAGGCAGAAAgacccaacuugcauccugg
.....(((((((((((.(........))))))))))))(((.((..(((((((((.((((((.......)))))).)))))))))..)).)))................

Structure

ggccucaguuuccuccacugaagaaugggaggaggcug   a  ga         g      ga 
                                      guc uu  gucuucaag cuagug  a
                                      ||| ||  ||||||||| ||||||  a
                                      cag AA  CGGAGGUUC GGUCAc  g
----------------------gguccuacguucaacc   A  GA         A      ga 

Annotation confidence Not enough data

Genome context

chr3: 10600720-10600828 [+]

Mature ptr-miR-378b

• Accession: MIMAT0024044
• Description: Pan troglodytes ptr-miR-378b mature miRNA
• Sequence: 71 - ACUGGACUUGGAGGCAGAAA - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116