Stem-loop ptr-mir-3138

Accession

MI0020594

Description

Pan troglodytes ptr-mir-3138 precursor miRNA

Sequence

cuggagccuuccccugcccuccucggcacuucccccaccucacugcccgggugcccacaagacuguggACAGUGAGGUAGAGGGAGUGccgaggaggggacagcugggccu
..((.((((....((((((((((((((((((((.(.((((((((((((((............))).)).))))))))).).)))))))))))))))))..)))..))))))

Structure

cu  a    uccc   --                 c c         -  -   gugcc 
  gg gccu    cug  cccuccucggcacuucc c accucacug cc cgg     c
  || ||||    |||  ||||||||||||||||| | ||||||||| || |||      
  uc cggg    gac  gggaggagccGUGAGGG G UGGAGUGAC gg guc     a
--  -    --uc   ag                 A A         A  u   agaac 

Annotation confidence Not enough data

Genome context

chr4: 10255758-10255868 [-]

Mature ptr-miR-3138

• Accession: MIMAT0024047
• Description: Pan troglodytes ptr-miR-3138 mature miRNA
• Sequence: 69 - ACAGUGAGGUAGAGGGAGUG - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116