Stem-loop ptr-mir-4536

Accession

MI0020599

Description

Pan troglodytes ptr-mir-4536 precursor miRNA

Sequence

augcacuguauauaaacauaaUGUGGUAGAUAUAUGCACGAuauagguauguauguauguauguauaaaagcagggcaguauauauaucgugcauauaucuaccacauuuu
...................((((((((((((((((((((((((((.((((...(((.(((.(......).)))..))))))).))))))))))))))))))))))))))..

Structure

augcacuguauauaaacau                          g    gua   -a   a gu 
                   aaUGUGGUAGAUAUAUGCACGAuaua guau   ugu  ugu u  a
                   |||||||||||||||||||||||||| ||||   |||  ||| |   
                   uuacaccaucuauauacgugcuauau uaug   acg  acg a  u
-----------------uu                          a    ---   gg   a aa 

Annotation confidence Not enough data

Genome context

chrX: 55219288-55219398 [+]

Mature ptr-miR-4536

• Accession: MIMAT0024052
• Description: Pan troglodytes ptr-miR-4536 mature miRNA
• Sequence: 22 - UGUGGUAGAUAUAUGCACGA - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116