Stem-loop ptr-mir-4524a

Accession

MI0020606

Description

Pan troglodytes ptr-mir-4524a precursor miRNA

Sequence

454 reads, 4.0 reads per million, 24 experiments

aaagagacagugauuacccuuccucuuuggaaggauAGCAGCAUGAACCUGUCUCAcugcagaauuauuuUGAGACAGGCUUAUGCUGCUAUccuucaaaagaacacaucc
((((((..((........))..)))))).(((((((((((((((((.(((((((((..............))))))))).)))))))))))))))))..............

Structure

aaagagacagugauuacccuuccucuuug                 A         cugcag 
                             gaaggauAGCAGCAUGA CCUGUCUCA      a
                             ||||||||||||||||| |||||||||       
                             cuuccUAUCGUCGUAUU GGACAGAGU      a
---------------ccuacacaagaaaa                 C         uuuauu 

Annotation confidence High

Genome context

chr17: 68519306-68519416 [-]

Mature ptr-miR-4524a-5p

• Accession: MIMAT0052417
• Description: Pan troglodytes ptr-miR-4524a-5p mature miRNA
• Sequence: 37 - AGCAGCAUGAACCUGUCUCA - 56
• Evidence: experimental ; Illumina [1]

Mature ptr-miR-4524a-3p

• Accession: MIMAT0024059
• Description: Pan troglodytes ptr-miR-4524a-3p mature miRNA
• Sequence: 71 - UGAGACAGGCUUAUGCUGCUAU - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116