Stem-loop ptr-mir-3193

Accession

MI0020609

Description

Pan troglodytes ptr-mir-3193 precursor miRNA

Sequence

cucccccaccaaccccagggCUCCUGCGUAGGAUCUGAGGAGuggacgagucucauuacccagcuccugagcaggaaaaauaugucauuggcaagggucuaagaaucuuccu
.......(((....(((((((((((((.(((((.(((.((((((((....)).)))).))))).))))).)))))).......))).))))....)))..............

Structure

-------cuccccc   aacc    -   -------      G     U   A  -    -  c 
              acc    ccag ggC       UCCUGC UAGGA CUG GG AGug ga g
              |||    |||| |||       |||||| ||||| ||| || |||| ||  
              ugg    gguu cug       aggacg guccu gac cc uuac cu a
uccuucuaagaauc   gaac    a   uauaaaa      a     c   -  a    u  g 

Annotation confidence Not enough data

Genome context

chr20: 32972336-32972447 [+]

Mature ptr-miR-3193

• Accession: MIMAT0024062
• Description: Pan troglodytes ptr-miR-3193 mature miRNA
• Sequence: 21 - CUCCUGCGUAGGAUCUGAGGAG - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116