Stem-loop ptr-mir-4423

Accession

MI0020615

Description

Pan troglodytes ptr-mir-4423 precursor miRNA

Sequence

cucacaccaucaggugccugacaucauguacugcaguugccuuuuuguucccaugcuguuuaagcccagcAUAGGCACCAAAAAGCAACAAcaguauaugaaacugagaca
((((((((....)))).......((((((((((..(((((.((((((...((((((((........)))))).))...)))))))))))..))))))))))...))))...

Structure

---    caccaucaggugccugaca          ca     c      uuc  -      uuu 
   cuca                   ucauguacug  guugc uuuuug   cc augcug   a
   ||||                   ||||||||||  ||||| ||||||   || ||||||    
   gagu                   aguauaugac  CAACG AAAAAC   GG UAcgac   a
aca    ----------------caa          AA     -      CAC  A      ccg 

Annotation confidence Not enough data

Genome context

chr1: 85560703-85560813 [+]

Mature ptr-miR-4423

• Accession: MIMAT0024068
• Description: Pan troglodytes ptr-miR-4423 mature miRNA
• Sequence: 71 - AUAGGCACCAAAAAGCAACAA - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116