Stem-loop ptr-mir-3165

Accession

MI0020617

Description

Pan troglodytes ptr-mir-3165 precursor miRNA

Sequence

auuuuugguacccgguggcaAGGUGGAUGCAAUGUGACCUCAacucuugguccucugaggucacauuguauccagcuuaccacuggguacuaacgugugggcagcagcugca
....((((((((((((((.(((.((((((((((((((((((((((...)))....))))))))))))))))))).))).)))))))))))))).......((((...)))).

Structure

---------------auuu              c   G                   ----   c 
                   uugguacccggugg aAG UGGAUGCAAUGUGACCUCA    acu  
                   |||||||||||||| ||| |||||||||||||||||||    ||| u
                   aaucaugggucacc uuc accuauguuacacuggagu    ugg  
acgucgacgacgggugugc              a   g                   cucc   u 

Annotation confidence Not enough data

Genome context

chr11: 71991512-71991623 [-]

Mature ptr-miR-3165

• Accession: MIMAT0024070
• Description: Pan troglodytes ptr-miR-3165 mature miRNA
• Sequence: 21 - AGGUGGAUGCAAUGUGACCUCA - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116