Stem-loop ptr-mir-2114

Accession

MI0020619

Description

Pan troglodytes ptr-mir-2114 precursor miRNA

Sequence

uggggccaaagacaggccucugccuccaugcuccuagucccuuccuugaagcggucggauaaucacaugaCGAGCCUCAAGCAAGGGACUUCAagcugguggcuuccagc
.((((((.......)))))).(((.(((.(((...((((((((.(((((.((.((((..........))))..)).))))).))))))))...)))))).))).......

Structure

uggggccaaagacaggccucu   u   u   ccu        c     a  -g    gaua 
                     gcc cca gcu   agucccuu cuuga gc  gucg    a
                     ||| ||| |||   |||||||| ||||| ||  ||||     
                     cgg ggu cga   UCAGGGAA GAACU CG  Cagu    u
--------------cgaccuu   u   -   ACU        C     C  AG    acac 

Annotation confidence Not enough data

Genome context

chrX: 149954188-149954297 [+]

Mature ptr-miR-2114

• Accession: MIMAT0024072
• Description: Pan troglodytes ptr-miR-2114 mature miRNA
• Sequence: 71 - CGAGCCUCAAGCAAGGGACUUCA - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116