Stem-loop ggo-let-7f

Accession

MI0020620

Description

Gorilla gorilla ggo-let-7f precursor miRNA

Sequence

2349218 reads, 189792.0 reads per million, 4 experiments

aaaacauugcucuaucagagUGAGGUAGUAGAUUGUAUAGUUgugggguagugauuuuacccuguucaggagauaaCUAUACAAUCUAUUGCCUUCCcugaggaguagac
.......((((((.((((.(.((((((((((((((((((((((((((((((.....))))))).........))))))))))))))))))))))).)))))))))))...

Structure

aaaacau      a    a U                       ---------       u 
       ugcucu ucag g GAGGUAGUAGAUUGUAUAGUUgu         gggguag g
       |||||| |||| | |||||||||||||||||||||||         ||||||| a
       augagg aguc C UUCCGUUAUCUAACAUAUCaaua         ucccauu u
----cag      -    - C                       gaggacuug       u 

Annotation confidence High

Genome context

chr9: 76195198-76195307 [+]

Mature ggo-let-7f-5p

• Accession: MIMAT0024073
• Description: Gorilla gorilla ggo-let-7f-5p mature miRNA
• Sequence: 21 - UGAGGUAGUAGAUUGUAUAGUU - 42
• Evidence: experimental ; Illumina [1]

Mature ggo-let-7f-3p

• Accession: MIMAT0061275
• Description: Gorilla gorilla ggo-let-7f-3p mature miRNA
• Sequence: 77 - CUAUACAAUCUAUUGCCUUCC - 97
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116