miRBase entry: ggo-let-7c

Stem-loop ggo-let-7c

Accession

MI0020622

Description

Gorilla gorilla ggo-let-7c precursor miRNA

Sequence

gaagcugugugcauccggguUGAGGUAGUAGGUUGUAUGGUuuagaguuacacccugggaguuaacuguacaaccuucuagcuuuccuuggagcacacuugagccauc
...(((((((((.((((((..(((.(((.(((((((((((((..((.(..((...))..).))))))))))))))).))).)))..))))))))))))...)))....

Structure

-gaa   ---      a      uU   G   U             ua  g ua  c 
    gcu   gugugc uccggg  GAG UAG AGGUUGUAUGGUu  ga u  ca  
    |||   |||||| ||||||  ||| ||| |||||||||||||  || |  || c
    cga   cacacg agguuc  uuc auc uccaacaugucaa  uu a  gu  
cuac   guu      -      cu   g   u             --  g gg  c

Annotation confidence Not enough data

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Genome context

chr21: 7580444-7580551 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ggo-let-7c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-let-7c

Accession	MIMAT0024075
Description	Gorilla gorilla ggo-let-7c mature miRNA
Sequence	21 - UGAGGUAGUAGGUUGUAUGGU - 41
Evidence	experimental Illumina [1]

References

PubMed ID: 22453055
Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
"Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
"BMC Genomics (2012) 13:116