Stem-loop ggo-let-7g

Accession

MI0020623

Description

Gorilla gorilla ggo-let-7g precursor miRNA

Literature search

5 open access papers mention ggo-let-7g
(15 sentences)

Sequence

286546 reads, 21652.0 reads per million, 4 experiments

ccuuuugccugauuccaggcUGAGGUAGUAGUUUGUACAGUUugagggucuaugauaccacccgguacaggagauaaCUGUACAGGCCACUGCCUUGCcaggaacagcgcg
......(((((.((((.(((.((((((((.((((((((((((.....((((.((.((((....))))))..)))))))))))))))).))))))))))).))))))).)).

Structure

ccuuuu  -   a    a   U        A            ugagg    -a  a    a 
      gc cug uucc ggc GAGGUAGU GUUUGUACAGUU     gucu  ug uacc c
      || ||| |||| ||| |||||||| ||||||||||||     ||||  || ||||  
      cg gac aagg cCG UUCCGUCA CGGACAUGUCaa     uaga  ac augg c
-----g  c   -    a   -        C            -----    gg  -    c 

Annotation confidence High

Genome context

chr3: 53291713-53291823 [-]

Mature ggo-let-7g-5p

• Accession: MIMAT0024076
• Description: Gorilla gorilla ggo-let-7g-5p mature miRNA
• Sequence: 21 - UGAGGUAGUAGUUUGUACAGUU - 42
• Evidence: experimental ; Illumina [1]

Mature ggo-let-7g-3p

• Accession: MIMAT0061277
• Description: Gorilla gorilla ggo-let-7g-3p mature miRNA
• Sequence: 78 - CUGUACAGGCCACUGCCUUGC - 98
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116