miRBase entry: ggo-let-7e

Stem-loop ggo-let-7e

Accession

MI0020626

Description

Gorilla gorilla ggo-let-7e precursor miRNA

Sequence

accugccgcgccccccgggcUGAGGUAGGAGGUUGUAUAGUugaggaggacacccaaggagaucacuauacggccuccuagcuuuccccaggcugcgcccugcacggga
.(((((.((((..((.(((..(((.((((((((((((((((.((((.(....))).......)))))))))))))))))).)))..))).))..))))...))).))..

Structure

-a  -   --c    cc  c   cU   G                u  -------  a g 
  cc ugc   gcgc  cc ggg  GAG UAGGAGGUUGUAUAGU ga       gg g a
  || |||   ||||  || |||  ||| |||||||||||||||| ||       || |  
  gg acg   cgcg  gg ccc  uuc auccuccggcauauca cu       cc c c
ag  c   ucc    uc  a   cu   g                -  agaggaa  - a

Annotation confidence Not enough data

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Genome context

chr19: 51003932-51004040 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ggo-let-7e

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-let-7e

Accession	MIMAT0024079
Description	Gorilla gorilla ggo-let-7e mature miRNA
Sequence	21 - UGAGGUAGGAGGUUGUAUAGU - 41
Evidence	experimental Illumina [1]

References

PubMed ID: 22453055
Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
"Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
"BMC Genomics (2012) 13:116