Stem-loop ggo-mir-128

Accession

MI0020629

Description

Gorilla gorilla ggo-mir-128 precursor miRNA

Sequence

42644 reads, 3826.0 reads per million, 4 experiments

ugcaauaauuggccuuguuccugagcuguuggauuCGGGGCCGUAGCACUGUCUGAgagguuuacauuucUCACAGUGAACCGGUCUCUUUuucagcugcuuccuggcu
..........((((..(.....((((.((((((...(((((((...((((((..(((((((....)))))))))))))...)))))))...)))))).)))))..))))

Structure

ugcaauaauu    uu uuccu    u      uuC       UAG      CU       u 
          ggcc  g     gagc guugga   GGGGCCG   CACUGU  GAgaggu u
          ||||  |     |||| ||||||   |||||||   ||||||  |||||||  
          ucgg  c     uucg cgacuu   CUCUGGC   GUGACA  CUcuuua a
----------    uc -----    u      UUU       CAA      --       c 

Annotation confidence High

Genome context

chr2B: 27593250-27593358 [+]

Mature ggo-miR-128-5p

• Accession: MIMAT0061281
• Description: Gorilla gorilla ggo-miR-128-5p mature miRNA
• Sequence: 36 - CGGGGCCGUAGCACUGUCUGA - 56
• Evidence: experimental ; Illumina [1]

Mature ggo-miR-128-3p

• Accession: MIMAT0024082
• Description: Gorilla gorilla ggo-miR-128-3p mature miRNA
• Sequence: 71 - UCACAGUGAACCGGUCUCUUU - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116