Stem-loop ggo-let-7i

Accession

MI0020630

Description

Gorilla gorilla ggo-let-7i precursor miRNA

Literature search

1 open access papers mention ggo-let-7i
(1 sentences)

Sequence

77780 reads, 5577.0 reads per million, 4 experiments

cccgacaccauggcccuggcUGAGGUAGUAGUUUGUGCUGUUggucggguugugacauugcccgcuguggagauaaCUGCGCAAGCUACUGCCUUGCUagugcuggug
.....(((((..((.(((((.(((((((((((((((((.(((((.(((((.........)))))))........))).)))))))))))))))))))))).)))))))

Structure

cccga     ug  c     U                 U   --------  u     ugu 
     cacca  gc cuggc GAGGUAGUAGUUUGUGC GUU        gg cgggu   g
     |||||  || ||||| ||||||||||||||||| |||        || |||||   a
     guggu  cg gaUCG UUCCGUCAUCGAACGCG Caa        uc gcccg   c
-----     --  u     -                 U   uagaggug  -     uua 

Annotation confidence High

Genome context

chr12: 23423228-23423335 [-]

Mature ggo-let-7i-5p

• Accession: MIMAT0024083
• Description: Gorilla gorilla ggo-let-7i-5p mature miRNA
• Sequence: 21 - UGAGGUAGUAGUUUGUGCUGUU - 42
• Evidence: experimental ; Illumina [1]

Mature ggo-let-7i-3p

• Accession: MIMAT0061282
• Description: Gorilla gorilla ggo-let-7i-3p mature miRNA
• Sequence: 77 - CUGCGCAAGCUACUGCCUUGCU - 98
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116