Stem-loop ggo-mir-423

Accession

MI0020632

Description

Gorilla gorilla ggo-mir-423 precursor miRNA

Literature search

1 open access papers mention ggo-mir-423
(1 sentences)

Sequence

24700 reads, 1849.0 reads per million, 4 experiments

ggaaauaaaggaaguuaggcUGAGGGGCAGAGAGCGAGACUUUucuauuuuccaaaAGCUCGGUCUGAGGCCCCUCAGUcuugcuuccuaccccgcgcuugaguuucucccc
........(((((((.((((((((((((..(((.((((.(((((.........))))))))).)))...)))))))))))).))))))).......................

Structure

---------------ggaaauaa       u            -AG   G    A     cua 
                       aggaagu aggcUGAGGGGC   AGA CGAG CUUUu   u
                       ||||||| ||||||||||||   ||| |||| |||||   u
                       uccuucg ucUGACUCCCCG   UCU GCUC GAaaa   u
ccccucuuugaguucgcgcccca       u            GAG   G    -     ccu 

Annotation confidence High

Genome context

chr5: 53367102-53367213 [-]

Mature ggo-miR-423-5p

• Accession: MIMAT0024085
• Description: Gorilla gorilla ggo-miR-423-5p mature miRNA
• Sequence: 21 - UGAGGGGCAGAGAGCGAGACUUU - 43
• Evidence: experimental ; Illumina [1]

Mature ggo-miR-423-3p

• Accession: MIMAT0061284
• Description: Gorilla gorilla ggo-miR-423-3p mature miRNA
• Sequence: 57 - AGCUCGGUCUGAGGCCCCUCAGU - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116