Stem-loop ggo-mir-185

Accession

MI0020633

Description

Gorilla gorilla ggo-mir-185 precursor miRNA

Sequence

19195 reads, 1465.0 reads per million, 4 experiments

ucgagcagggggcgagggauUGGAGAGAAAGGCAGUUCCUGAugguccccuccccAGGGGCUGGCUUUCCUCUGGUccuucccucccaaugaccgcgucuucgucgagg
.......(((((.((((((((((((.(((((.(((((((((..((......)).))))))))).))))))))))))))))).)))))......((((....)).))...

Structure

---------------ucgagca     c            A     G         Au  uc 
                      ggggg gagggauUGGAG GAAAG CAGUUCCUG  gg  c
                      ||||| |||||||||||| ||||| |||||||||  ||   
                      cccuc cuuccUGGUCUC CUUUC GUCGGGGAc  cc  c
ggagcugcuucugcgccaguaa     c            -     G         -c  uc 

Annotation confidence High

Genome context

chr22: 3304066-3304174 [+]

Mature ggo-miR-185-5p

• Accession: MIMAT0024086
• Description: Gorilla gorilla ggo-miR-185-5p mature miRNA
• Sequence: 21 - UGGAGAGAAAGGCAGUUCCUGA - 42
• Evidence: experimental ; Illumina [1]

Mature ggo-miR-185-3p

• Accession: MIMAT0061285
• Description: Gorilla gorilla ggo-miR-185-3p mature miRNA
• Sequence: 56 - AGGGGCUGGCUUUCCUCUGGU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116