miRBase entry: ggo-mir-129

Stem-loop ggo-mir-129


Accession
MI0020637
Description
Gorilla gorilla ggo-mir-129 precursor miRNA


Sequence

11504 reads, 921.0 reads per million, 4 experiments
aagccggcauauucugcccuucgcgaauCUUUUUGCGGUCUGGGCUUGcuguacauaacucaauagccggAAGCCCUUACCCCAAAAAGCAUuugcggagggcgcacu
..............(((((((((((((((((((((.(((..(((((((((((..........)))))...))))))..))).))))))).))))))))))))))....

Structure
aagccggcauauuc              -       C   CU      ---     acau 
              ugcccuucgcgaau CUUUUUG GGU  GGGCUU   Gcugu    a
              |||||||||||||| ||||||| |||  ||||||   |||||     
              gcgggaggcguuUA GAAAAAC CCA  CCCGAA   cgaua    a
----------ucac              C       C   UU      ggc     acuc 


Annotation confidence High
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Genome context
chr11: 43881534-43881641 [+]

Database links

Mature ggo-miR-129-5p

Accession MIMAT0061287
Description Gorilla gorilla ggo-miR-129-5p mature miRNA
Sequence 29 - CUUUUUGCGGUCUGGGCUUG - 48
Evidence experimental
Illumina [1]

Mature ggo-miR-129-3p

Accession MIMAT0024090
Description Gorilla gorilla ggo-miR-129-3p mature miRNA
Sequence 71 - AAGCCCUUACCCCAAAAAGCAU - 92
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116