Stem-loop ggo-mir-127

Accession

MI0020641

Description

Gorilla gorilla ggo-mir-127 precursor miRNA

Literature search

1 open access papers mention ggo-mir-127
(1 sentences)

Sequence

guaaaaggucucgcugugaucacugucuccagccugcugaagcucagagggcucugauucagaaagaucaUCGGAUCCGUCUGAGCUUGGCuggucggaagucucaucauc
......((((.......))))......(((.(((.(((.(((((((((.((.((((((((.....))..)))))).)).)))))))))))).))).)))............

Structure

guaaaaggucucgcugugaucacuguc   a   u   g         g  c      --  a 
                           ucc gcc gcu aagcucaga gg ucugau  uc g
                           ||| ||| ||| ||||||||| || ||||||  || a
                           agg ugg CGG UUCGAGUCU CC AGGCUa  ag a
---------------cuacuacucuga   c   u   -         G  U      cu  a 

Annotation confidence Not enough data

Genome context

chr14: 84900208-84900318 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from ggo-mir-127

Mature ggo-miR-127

• Accession: MIMAT0024094
• Description: Gorilla gorilla ggo-miR-127 mature miRNA
• Sequence: 71 - UCGGAUCCGUCUGAGCUUGGC - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116