miRBase entry: ggo-mir-23b

Stem-loop ggo-mir-23b

Accession

MI0020642

Description

Gorilla gorilla ggo-mir-23b precursor miRNA

Sequence

gggcggcgcugcucucaggugcucuggcugcuuggguuccuggcaugcugauuugugacuuaagauuaaaAUCACAUUGCCAGGGAUUACCAcgcaaccacgaccuug
(((((....)))))..((((....(((.(((.(((((((((((((((.((((((..............)))))))).))))))))))..))).))).)))..))))..

Structure

gggcggcgcugcucuc    gcuc   c   u   --          -  c      gugacu 
                aggu    ugg ugc ugg  guuccuggca ug ugauuu      u
                ||||    ||| ||| |||  |||||||||| || ||||||       
                ucca    acc acg ACC  UAGGGACCGU AC ACUAaa      a
--------------gu    --gc   a   c   AU          U  -      auuaga

Annotation confidence Not enough data

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Genome context

chr9: 77106210-77106317 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ggo-mir-23b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-23b

Accession	MIMAT0024095
Description	Gorilla gorilla ggo-miR-23b mature miRNA
Sequence	71 - AUCACAUUGCCAGGGAUUACCA - 92
Evidence	experimental Illumina [1]

References

PubMed ID: 22453055
Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
"Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
"BMC Genomics (2012) 13:116