Stem-loop ggo-mir-146b

Accession

MI0020643

Description

Gorilla gorilla ggo-mir-146b precursor miRNA

Literature search

1 open access papers mention ggo-mir-146b
(1 sentences)

Sequence

43147 reads, 2935.0 reads per million, 4 experiments

gaacuuuggccaccuggcacUGAGAACUGAAUUCCAUAGGCUGugagcucuagcaauGCCCUGUGGACUCAGUUCUGGUgcccggcagugcuacaacaucaaugccaagg
...(((((((..((.((((((.((((((((..(((((((((..((........))..).)))))))).)))))))))))))).))..((......))......)))))))

Structure

gaa       ----------------ca  u      G        AU        - UG  agc 
   cuuuggc                  cc ggcacU AGAACUGA  UCCAUAGG C  ug   u
   |||||||                  || |||||| ||||||||  |||||||| |  ||    
   ggaaccg                  gg ccgUGG UCUUGACU  AGGUGUCC G  ac   c
---       uaacuacaacaucgugac  c      -        -C        C ua  gau 

Annotation confidence High

Genome context

chr10: 117112453-117112562 [+]

Mature ggo-miR-146b-5p

• Accession: MIMAT0024096
• Description: Gorilla gorilla ggo-miR-146b-5p mature miRNA
• Sequence: 21 - UGAGAACUGAAUUCCAUAGGCUG - 43
• Evidence: experimental ; Illumina [1]

Mature ggo-miR-146b-3p

• Accession: MIMAT0061290
• Description: Gorilla gorilla ggo-miR-146b-3p mature miRNA
• Sequence: 58 - GCCCUGUGGACUCAGUUCUGGU - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116