Stem-loop ggo-mir-22

Accession

MI0020644

Description

Gorilla gorilla ggo-mir-22 precursor miRNA

Literature search

1 open access papers mention ggo-mir-22
(2 sentences)

Sequence

15129 reads, 949.0 reads per million, 4 experiments

ccucucacgcccucaccuggcugagccgcaguAGUUCUUCAGUGGCAAGCUUUAuguccugacccagcuaAAGCUGCCAGUUGAAGAACUGUugcccucugccccuggcuu
........(((.......(((.(((..((((((((((((((((((((.((((((.((.........))))))))))))).))))))))))))))).))).)))...)))..

Structure

ccucucac   cucaccu   u   cc               -     A      u  ccu 
        gcc       ggc gag  gcaguAGUUCUUCAG UGGCA GCUUUA gu   g
        |||       ||| |||  ||||||||||||||| ||||| |||||| ||   a
        cgg       ccg cuc  cguUGUCAAGAAGUU ACCGU CGAAau cg   c
------uu   ----ucc   u   -c               G     -      -  acc 

Annotation confidence High

Genome context

chr17: 1585713-1585823 [-]

Mature ggo-miR-22-5p

• Accession: MIMAT0061291
• Description: Gorilla gorilla ggo-miR-22-5p mature miRNA
• Sequence: 33 - AGUUCUUCAGUGGCAAGCUUUA - 54
• Evidence: experimental ; Illumina [1]

Mature ggo-miR-22-3p

• Accession: MIMAT0024097
• Description: Gorilla gorilla ggo-miR-22-3p mature miRNA
• Sequence: 71 - AAGCUGCCAGUUGAAGAACUGU - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116