miRBase entry: ggo-mir-181d

Stem-loop ggo-mir-181d

Accession

MI0020647

Description

Gorilla gorilla ggo-mir-181d precursor miRNA

Sequence

ccacagccgaggucacaaucAACAUUCAUUGUUGUCGGUGGGUugugaggaccgaggccagacccaccgggggaugaaugucacuguggcugggccagacacggcuua
...((((((.(((........(((((((((....((((((((((.((.(........)))))))))))))..))))))))).))).))))))((((......))))..

Structure

-------------cca      a   cacaaucA         GUUG          g  a gac 
                cagccg ggu        ACAUUCAUU    UCGGUGGGUu ug g   c
                |||||| |||        |||||||||    |||||||||| || |    
                gucggu uca        uguaaguag    ggccacccag ac c   g
auucggcacagaccgg      g   -------c         --gg          -  - gga

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

chr19: 13652086-13652193 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ggo-mir-181d

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-181d

Accession	MIMAT0024100
Description	Gorilla gorilla ggo-miR-181d mature miRNA
Sequence	21 - AACAUUCAUUGUUGUCGGUGGGU - 43
Evidence	experimental Illumina [1]

References

PubMed ID: 22453055
Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
"Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
"BMC Genomics (2012) 13:116