Stem-loop ggo-mir-148b

Accession

MI0020655

Description

Gorilla gorilla ggo-mir-148b precursor miRNA

Sequence

5186 reads, 377.0 reads per million, 4 experiments

aucauuuccaagcacgauuagcauuugagguGAAGUUCUGUUAUACACUCAGGCUguggcucucugaaagUCAGUGCAUCACAGAACUUUGUcucgaaagcuuucuagc
...........((..((..(((.((((((((((((((((((.((.((((..((((.............)))))))).)).)))))))))))))))))).))).))..))

Structure

aucauuuccaa  ac  uu   a                  U  A    CA    guggc 
           gc  ga  agc uuugagguGAAGUUCUGU AU CACU  GGCU     u
           ||  ||  ||| |||||||||||||||||| || ||||  ||||     c
           cg  cu  ucg aagcucUGUUUCAAGACA UA GUGA  CUga     u
-----------  au  -u   a                  C  C    --    aaguc 

Annotation confidence High

Genome context

chr12: 31822817-31822925 [-]

Mature ggo-miR-148b-5p

• Accession: MIMAT0061297
• Description: Gorilla gorilla ggo-miR-148b-5p mature miRNA
• Sequence: 32 - GAAGUUCUGUUAUACACUCAGGCU - 55
• Evidence: experimental ; Illumina [1]

Mature ggo-miR-148b-3p

• Accession: MIMAT0024108
• Description: Gorilla gorilla ggo-miR-148b-3p mature miRNA
• Sequence: 71 - UCAGUGCAUCACAGAACUUUGU - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116