Stem-loop ggo-mir-30c

Accession

MI0020658

Description

Gorilla gorilla ggo-mir-30c precursor miRNA

Sequence

3685 reads, 263.0 reads per million, 4 experiments

gagcacugagcgacagauacUGUAAACAUCCUACACUCUCAGCUguggaaaguaagaaagCUGGGAGAAGGCUGUUUACUcuuucugccuuggaagucaacuaaagagaaaug
((...(((((.(.((((....(((((((.(((...(((((((((..............))))))))).))).)))))))....))))))))))...))...............

Structure

---------------  gca     c a    uacU       U   ACA         guggaa 
               ga   cugag g caga    GUAAACA CCU   CUCUCAGCU      a
               ||   ||||| | ||||    ||||||| |||   |||||||||       
               cu   gguuc c gucu    CAUUUGU GGA   GAGGGUCga      g
guaaagagaaaucaa  gaa     - -    uucU       C   --A         aagaau 

Annotation confidence High

Genome context

chr6: 73286638-73286750 [-]

Mature ggo-miR-30c-5p

• Accession: MIMAT0024111
• Description: Gorilla gorilla ggo-miR-30c-5p mature miRNA
• Sequence: 21 - UGUAAACAUCCUACACUCUCAGCU - 44
• Evidence: experimental ; Illumina [1]

Mature ggo-miR-30c-3p

• Accession: MIMAT0061299
• Description: Gorilla gorilla ggo-miR-30c-3p mature miRNA
• Sequence: 61 - CUGGGAGAAGGCUGUUUACU - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116