miRBase entry: ggo-mir-433

Stem-loop ggo-mir-433

Accession

MI0020660

Description

Gorilla gorilla ggo-mir-433 precursor miRNA

Sequence

ccaaugcccggggagaaguacggugagccugucauuauucagagaggcuagauccucuguguugagaaggAUCAUGAUGGGCUCCUCGGUGuucuccagguagcggcac
((..((((...((((((...(((.(((((((((((.(((((.(((((......))))).))........))).))))))))))).)))...)))))).))))..))...

Structure

---  aa    cgg      gua   u           u   --------  g     cu 
   cc  ugcc   ggagaa   cgg gagccugucau auu        ca agagg  a
   ||  ||||   ||||||   ||| ||||||||||| |||        || |||||   
   gg  augg   ccucuu   GCU CUCGGGUAGUA UAg        gu ucucc  g
cac  cg    --a      GUG   C           C   gaagaguu  g     ua

Annotation confidence Not enough data

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Genome context

chr14: 84899122-84899230 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from ggo-mir-433

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-433

Accession	MIMAT0024113
Description	Gorilla gorilla ggo-miR-433 mature miRNA
Sequence	71 - AUCAUGAUGGGCUCCUCGGUG - 91
Evidence	experimental Illumina [1]

References

PubMed ID: 22453055
Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
"Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
"BMC Genomics (2012) 13:116