Stem-loop ggo-mir-885

Accession

MI0020661

Description

Gorilla gorilla ggo-mir-885 precursor miRNA

Sequence

6251 reads, 474.0 reads per million, 4 experiments

cugcagaaggcccagucugcuacucggcccgcacucucUCCAUUACACUACCCUGCCUCUucuccaugagAGGCAGCGGGGUGUAGUGGAUagagcacggguucaagucc
..(((((........))))).(((.((((((..((((.(((((((((((.(((((((((((......))))))))).))))))))))))).))))..))))))..)))..

Structure

cugcagaaggcccagucugcu   -c      ca    c           A  -         cu 
                     acu  ggcccg  cucu UCCAUUACACU CC CUGCCUCUu  c
                     |||  ||||||  |||| ||||||||||| || |||||||||   
                     uga  uugggc  gaga AGGUGAUGUGG GG GACGGAgag  c
-------------------cc   ac      ac    U           -  C         ua 

Annotation confidence High

Genome context

chr3: 10654007-10654116 [-]

Mature ggo-miR-885-5p

• Accession: MIMAT0061302
• Description: Gorilla gorilla ggo-miR-885-5p mature miRNA
• Sequence: 39 - UCCAUUACACUACCCUGCCUCU - 60
• Evidence: experimental ; Illumina [1]

Mature ggo-miR-885-3p

• Accession: MIMAT0024114
• Description: Gorilla gorilla ggo-miR-885-3p mature miRNA
• Sequence: 71 - AGGCAGCGGGGUGUAGUGGAU - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116