miRBase entry: ggo-mir-499a

Stem-loop ggo-mir-499a


Accession
MI0020665
Description
Gorilla gorilla ggo-mir-499a precursor miRNA


Sequence

gugccuugggcgggcggcugUUAAGACUUGCAGUGAUGUUuaacuccucuccacgugaacaucacagcaagucugugcugcuucccgucccuacgcugccugggcaggg
.......(((((((.(((.((..((((((((.((((((((((.............)))))))))).))))))))..)).))).)))))))...(.((((....)))).)

Structure
------------gugccuu       c   u  UA        A          acucc 
                   gggcggg ggc gU  AGACUUGC GUGAUGUUua     u
                   ||||||| ||| ||  |||||||| ||||||||||     c
                   ccugccc ucg cg  ucugaacg cacuacaagu     u
gggacggguccgucgcauc       u   u  ug        a          gcacc 


Annotation confidence Not enough data
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Genome context
chr20: 33655132-33655240 [+]

Database links

Mature ggo-miR-499a

Accession MIMAT0024118
Description Gorilla gorilla ggo-miR-499a mature miRNA
Sequence 21 - UUAAGACUUGCAGUGAUGUU - 40
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116