Stem-loop ggo-mir-30e

Accession

MI0020671

Description

Gorilla gorilla ggo-mir-30e precursor miRNA

Literature search

1 open access papers mention ggo-mir-30e
(1 sentences)

Sequence

5660 reads, 387.0 reads per million, 4 experiments

uucugggcagucuuugcuacUGUAAACAUCCUUGACUGGAAGCUguaagguguucagaggagCUUUCAGUCGGAUGUUUACAGcggcaggcugccacggucguccccagcuac
..(((((((((((..(((.((((((((((((..(((((((((((.(...(....)...).))))))))))))))))))))))).))))))))))).)))..............

Structure

------------uu   -        uu   a            UU           g aag u 
              cug ggcagucu  gcu cUGUAAACAUCC  GACUGGAAGCU u   g g
              ||| ||||||||  ||| ||||||||||||  ||||||||||| |   |  
              ggc ccgucgga  cgg GACAUUUGUAGG  CUGACUUUCga g   c u
caucgaccccugcu   a        --   c            --           g aga u 

Annotation confidence High

Genome context

chr1: 41240529-41240641 [+]

Mature ggo-miR-30e-5p

• Accession: MIMAT0024124
• Description: Gorilla gorilla ggo-miR-30e-5p mature miRNA
• Sequence: 21 - UGUAAACAUCCUUGACUGGAAGCU - 44
• Evidence: experimental ; Illumina [1]

Mature ggo-miR-30e-3p

• Accession: MIMAT0061304
• Description: Gorilla gorilla ggo-miR-30e-3p mature miRNA
• Sequence: 63 - CUUUCAGUCGGAUGUUUACAG - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116