Stem-loop ggo-mir-331

Accession

MI0020675

Description

Gorilla gorilla ggo-mir-331 precursor miRNA

Literature search

1 open access papers mention ggo-mir-331
(1 sentences)

Sequence

2244 reads, 180.0 reads per million, 4 experiments

cacucccaaggaguuugguuuuguuuggguuuguuCUAGGUAUGGUCCCAGGGAUcccagaucaaaccagGCCCCUGGGCCUAUCCUAGAAccaaccuaagcucgcgcauc
.(((((...))))).((.....(((((((((.((((((((.((((.(((((((...((...........)).))))))).)))))))))))).))))))))).....))..

Structure

cacucccaaggaguu  guuuu         u        U    U       AUc  agau 
               ug     guuuggguu guuCUAGG AUGG CCCAGGG   cc    c
               ||     ||||||||| |||||||| |||| |||||||   ||    a
               ac     cgaauccaa cAAGAUCC UAUC GGGUCCC   Gg    a
-------------cu  gcgcu         c        -    C       --C  acca 

Annotation confidence Not enough data

Genome context

chr12: 95017959-95018069 [+]

Mature ggo-miR-331-5p

• Accession: MIMAT0061306
• Description: Gorilla gorilla ggo-miR-331-5p mature miRNA
• Sequence: 36 - CUAGGUAUGGUCCCAGGGAU - 55
• Evidence: experimental ; Illumina [1]

Mature ggo-miR-331-3p

• Accession: MIMAT0024128
• Description: Gorilla gorilla ggo-miR-331-3p mature miRNA
• Sequence: 71 - GCCCCUGGGCCUAUCCUAGAA - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116