miRBase entry: ggo-mir-4446

Stem-loop ggo-mir-4446


Accession
MI0020676
Description
Gorilla gorilla ggo-mir-4446 precursor miRNA


Sequence

uacuucaggauugaugaguccaguggcucugguccauuucccugccauucccuuggcuucaauuuacuccCAGGGCUGGCAGUGAGAUGGGuuaaggcucacaccuuca
.......(((((....))))).((((((.(((((((((((.((((((...((((((.............)))))).)))))).))))))))))).))).))).......

Structure
uacuucaggauugaugagucca   -   c           c      uuc      cuuca 
                      gug gcu ugguccauuuc cugcca   ccuugg     a
                      ||| ||| ||||||||||| ||||||   ||||||     u
                      cac cgg auuGGGUAGAG GACGGU   GGGACc     u
---------------acuucca   u   a           U      --C      cucau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr3: 115101689-115101797 [+]

Database links

Mature ggo-miR-4446

Accession MIMAT0024129
Description Gorilla gorilla ggo-miR-4446 mature miRNA
Sequence 71 - CAGGGCUGGCAGUGAGAUGGG - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116