miRBase entry: ggo-mir-532

Stem-loop ggo-mir-532

Accession

MI0020678

Description

Gorilla gorilla ggo-mir-532 precursor miRNA

Sequence

ccgacgugcuuucucuccucCAUGCCUUGAGUGUAGGACCGuuggcaucuuaauuacccucccacacccaaggcuugcagaagagcgagccuucucuucccucucuagugc
..((.(.((((.((((.((.((.((((((.((((.(((..((.............))..))).)))).)))))).)).)).)))).))))).)).................

Structure

---------------cc  c u    u    c  c  U      A    A   CC  uggca 
                 ga g gcuu cucu cu CA GCCUUG GUGU GGA  Gu     u
                 || | |||| |||| || || |||||| |||| |||  ||     c
                 cu c cgag gaga ga gu cggaac caca ccu  ca     u
cgugaucucucccuucu  u -    c    a  c  u      c    c   cc  uuaau

Annotation confidence Not enough data

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Genome context

chrX: 50437081-50437191 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from ggo-mir-532

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-532

Accession	MIMAT0024131
Description	Gorilla gorilla ggo-miR-532 mature miRNA
Sequence	21 - CAUGCCUUGAGUGUAGGACCG - 41
Evidence	experimental Illumina [1]

References

PubMed ID: 22453055
Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
"Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
"BMC Genomics (2012) 13:116